Couple things to think about: Badger and skunk season opens the first Saturday in November. Not that I would fault you for shooting a skunk out of season, but an overzealous CO might make your life ( and wallet) miserable.
The stink will go away eventually, as few as a couple days, especially if it rains. I would disagree that it is a good cover scent. Deer know something is wrong there and they can probably semll it from a couple miles away. I wouldn't count on seeing much out of that stand for a couple days.